BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E07SP1|AL426049
(792 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig163 1019 0.0
3x_Contig1499 480 e-135
>3x_Contig163
Length = 1048
Score = 1019 bits (514), Expect = 0.0
Identities = 514/514 (100%)
Strand = Plus / Plus
Query: 279 gtctattttccagcaacaactatcttgggatgctgttcggaagattactggctggtattt 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctattttccagcaacaactatcttgggatgctgttcggaagattactggctggtattt 60
Query: 339 catgcgggagtttgatcgttgtcactccattgtttatcaatgagatgtcaccggtacatt 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgcgggagtttgatcgttgtcactccattgtttatcaatgagatgtcaccggtacatt 120
Query: 399 tgaaagggtctttaggatctatgaatcaagtaagtataaactgtgggattctagtgacac 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaagggtctttaggatctatgaatcaagtaagtataaactgtgggattctagtgacac 180
Query: 459 agtctttagctatgttatgggctaacatgttgcaatggagatggattcttctgttcggtg 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtctttagctatgttatgggctaacatgttgcaatggagatggattcttctgttcggtg 240
Query: 519 ggttaatctctttactaaattttggtctcttgttcagaataaacgagtcaccaagatggc 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggttaatctctttactaaattttggtctcttgttcagaataaacgagtcaccaagatggc 300
Query: 579 tcgtttctaaagggaacatgacagacgcagaggatgttttatcacaattacgtggcaact 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgtttctaaagggaacatgacagacgcagaggatgttttatcacaattacgtggcaact 360
Query: 639 ctcggcaggagtctagacaggagattgatggttggttgcaagggtcgcaaccggtgagga 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcggcaggagtctagacaggagattgatggttggttgcaagggtcgcaaccggtgagga 420
Query: 699 cgtttagtgatttagaagctcatacgaactctcagatgaatctggggtccaatttgaact 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgtttagtgatttagaagctcatacgaactctcagatgaatctggggtccaatttgaact 480
Query: 759 tggagagaccgtcatctacgagatcttcgttgag 792
||||||||||||||||||||||||||||||||||
Sbjct: 481 tggagagaccgtcatctacgagatcttcgttgag 514
>3x_Contig1499
Length = 7822
Score = 480 bits (242), Expect = e-135
Identities = 252/254 (99%), Gaps = 1/254 (0%)
Strand = Plus / Plus
Query: 1 gatctttgca-tatgggtatcatatgggagaactaaacgctcctgaagattacattactt 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7568 gatctttgcaatatgggtatcatatgggagaactaaacgctcctgaagattacattactt 7627
Query: 60 gcaaagcagagttaaatccaggatacgctgattcttttctaggtaggcttggtttagctc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7628 gcaaagcagagttaaatccaggatacgctgattcttttctaggtaggcttggtttagctc 7687
Query: 120 aatgtatacccttgactgattctcagttcggattaatcacgtctgttttcagtgttggag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7688 aatgtatacccttgactgattctcagttcggattaatcacgtctgttttcagtgttggag 7747
Query: 180 gattgattgggtctctagtggctggaccattagcggattcttatggtaggaaaccgatca 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 7748 gattgattgggtctctagtggctggaccataagcggattcttatggtaggaaaccgatca 7807
Query: 240 gttattggaactgt 253
||||||||||||||
Sbjct: 7808 gttattggaactgt 7821
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4560
Number of Sequences: 1807
Number of extensions: 4560
Number of successful extensions: 10
Number of sequences better than 1.0e-20: 2
length of query: 792
length of database: 10,358,551
effective HSP length: 16
effective length of query: 776
effective length of database: 10,329,639
effective search space: 8015799864
effective search space used: 8015799864
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)